Package: SNVLFDR 1.0.1

SNVLFDR: Empirical Bayes Single Nucleotide Variant Calling

Identifies single nucleotide variants in next-generation sequencing data by estimating their local false discovery rates. For more details, see Karimnezhad, A. and Perkins, T. J. (2024) <doi:10.1038/s41598-024-51958-z>.

Authors:Ali Karimnezhad [aut, cre, ctb]

SNVLFDR_1.0.1.tar.gz
SNVLFDR_1.0.1.zip(r-4.7)SNVLFDR_1.0.1.zip(r-4.6)SNVLFDR_1.0.1.zip(r-4.5)
SNVLFDR_1.0.1.tgz(r-4.6-any)SNVLFDR_1.0.1.tgz(r-4.5-any)
SNVLFDR_1.0.1.tar.gz(r-4.7-any)SNVLFDR_1.0.1.tar.gz(r-4.6-any)
SNVLFDR_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
SNVLFDR/json (API)

# Install 'SNVLFDR' in R:
install.packages('SNVLFDR', repos = c('https://empiricalbayes.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/empiricalbayes/snvlfdr/issues

On CRAN:

Conda:

2.70 score 146 downloads 2 exports 0 dependencies

Last updated from:632d36d5cf. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK99
source / vignettesOK109
linux-release-x86_64OK93
macos-release-arm64OK74
macos-oldrel-arm64OK60
windows-develOK72
windows-releaseOK61
windows-oldrelOK83
wasm-releaseOK81

Exports:get_LFDRsget_LFDRs_given_caller

Dependencies: