Package: SNVLFDR 1.0.1

SNVLFDR: Empirical Bayes Single Nucleotide Variant Calling

Identifies single nucleotide variants in next-generation sequencing data by estimating their local false discovery rates. For more details, see Karimnezhad, A. and Perkins, T. J. (2024) <doi:10.1038/s41598-024-51958-z>.

Authors:Ali Karimnezhad [aut, cre, ctb]

SNVLFDR_1.0.1.tar.gz
SNVLFDR_1.0.1.zip(r-4.5)SNVLFDR_1.0.1.zip(r-4.4)SNVLFDR_1.0.1.zip(r-4.3)
SNVLFDR_1.0.1.tgz(r-4.4-any)SNVLFDR_1.0.1.tgz(r-4.3-any)
SNVLFDR_1.0.1.tar.gz(r-4.5-noble)SNVLFDR_1.0.1.tar.gz(r-4.4-noble)
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SNVLFDR.pdf |SNVLFDR.html✨
SNVLFDR/json (API)

# Install 'SNVLFDR' in R:
install.packages('SNVLFDR', repos = c('https://empiricalbayes.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/empiricalbayes/snvlfdr/issues

On CRAN:

2 exports 0.84 score 0 dependencies 299 downloads

Last updated 8 months agofrom:632d36d5cf. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 23 2024
R-4.5-winOKAug 23 2024
R-4.5-linuxOKAug 23 2024
R-4.4-winOKAug 23 2024
R-4.4-macOKAug 23 2024
R-4.3-winOKAug 23 2024
R-4.3-macOKAug 23 2024

Exports:get_LFDRsget_LFDRs_given_caller

Dependencies: