Package: SNVLFDR 1.0.1

SNVLFDR: Empirical Bayes Single Nucleotide Variant Calling

Identifies single nucleotide variants in next-generation sequencing data by estimating their local false discovery rates. For more details, see Karimnezhad, A. and Perkins, T. J. (2024) <doi:10.1038/s41598-024-51958-z>.

Authors:Ali Karimnezhad [aut, cre, ctb]

SNVLFDR_1.0.1.tar.gz
SNVLFDR_1.0.1.zip(r-4.5)SNVLFDR_1.0.1.zip(r-4.4)SNVLFDR_1.0.1.zip(r-4.3)
SNVLFDR_1.0.1.tgz(r-4.5-any)SNVLFDR_1.0.1.tgz(r-4.4-any)SNVLFDR_1.0.1.tgz(r-4.3-any)
SNVLFDR_1.0.1.tar.gz(r-4.5-noble)SNVLFDR_1.0.1.tar.gz(r-4.4-noble)
SNVLFDR_1.0.1.tgz(r-4.4-emscripten)SNVLFDR_1.0.1.tgz(r-4.3-emscripten)
SNVLFDR.pdf |SNVLFDR.html✨
SNVLFDR/json (API)

# Install 'SNVLFDR' in R:
install.packages('SNVLFDR', repos = c('https://empiricalbayes.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/empiricalbayes/snvlfdr/issues

On CRAN:

Conda:

2.70 score 225 downloads 2 exports 0 dependencies

Last updated 1 years agofrom:632d36d5cf. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 16 2025
R-4.5-winOKFeb 16 2025
R-4.5-macOKFeb 16 2025
R-4.5-linuxOKFeb 16 2025
R-4.4-winOKFeb 16 2025
R-4.4-macOKFeb 16 2025
R-4.3-winOKFeb 16 2025
R-4.3-macOKFeb 16 2025

Exports:get_LFDRsget_LFDRs_given_caller

Dependencies: